Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113026534Potassium voltage-gated channel, shaker-related subfamily, member 1a; Belongs to the potassium channel family. (491 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.895
LOC113013133
Aldo_ket_red domain-containing protein.
   
 0.778
kcnab2
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
   
 0.778
LOC113010167
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
   
 0.722
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
   
 0.722
rpl34
Ribosomal protein L34.
  
 0.666
ENSACLP00000041460
Ribosomal protein L31.
   
 0.662
rpl21
Ribosomal protein L21.
  
 0.661
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.657
ENSACLP00000012057
Aldo_ket_red domain-containing protein.
   
 0.652
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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