STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003776Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
c9
Complement component 9.
   
 0.714
ENSACLP00000037520
Uncharacterized protein.
   
 0.689
RING1
Ring finger protein 1.
    
 0.674
ENSACLP00000033001
Ring finger protein 2.
    
 0.674
cfp
Uncharacterized protein.
    
 0.669
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.669
pcgf2
Polycomb group ring finger 2.
    
 0.666
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.666
C8A
Complement C8 alpha chain.
   
 0.660
c8g
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
  0.645
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.