Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113031231Immunoglobulin superfamily, member 9Bb. (1434 aa)    
Predicted Functional Partners:
ENSACLP00000004090
Immunoglobin superfamily, member 21a.
    
 0.435
ENSACLP00000005047
Immunoglobin superfamily, member 21b.
    
 0.435
ENSACLP00000001062
Bloodthirsty-related gene family, member 12.
      
 0.432
ENSACLP00000007097
Uncharacterized protein.
    
 0.431
fcer1g
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
    
 0.431
LOC113013058
Adhesion molecule with Ig-like domain 1.
    
 0.424
LOC113022491
Ig-like domain-containing protein.
    
 0.420
ENSACLP00000038387
Protein phosphatase 1, regulatory subunit 42.
      
 0.419
LOC113010089
Vav 3 guanine nucleotide exchange factor b.
    
 0.418
ntng1
Netrin g1a.
    
 0.418
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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