STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003781Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family. (1598 aa)    
Predicted Functional Partners:
LOC113007418
RAN binding protein 2.
   
 0.987
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.951
kpnb1
Karyopherin (importin) beta 1.
   
 0.948
nup153
Nucleoporin 153.
    
 0.917
rangap1
RAN GTPase activating protein 1a.
   
 0.913
ENSACLP00000028094
Ran GTPase activating protein 1b.
   
 0.913
ENSACLP00000029292
Uncharacterized protein.
   
 0.875
ranbp1
RAN binding protein 1.
   
 0.875
GCC2
GRIP domain-containing protein.
   
 0.875
nup50
Nucleoporin 50.
   
  0.871
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.