STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003802Uncharacterized protein; Belongs to the CD36 family. (72 aa)    
Predicted Functional Partners:
cd63
Tetraspanin.
     
 0.844
ENSACLP00000011034
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
     
 0.825
LOC113034412
Scavenger receptor class B, member 2a; Belongs to the CD36 family.
  
  
 
0.804
LOC113025828
Scavenger receptor class B, member 2c; Belongs to the CD36 family.
  
  
 
0.802
LOC113009513
Tetraspanin.
   
 
 0.690
LOC113032020
Uncharacterized protein.
    
 0.636
LOC113032148
Uncharacterized protein.
    
 0.636
LOC113011617
Apolipoprotein Ba.
    
 0.598
LOC113037288
Apolipoprotein Bb, tandem duplicate 2.
    
 0.598
ENSACLP00000033115
Vitellogenin domain-containing protein.
    
 0.598
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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