Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
llgl2LLGL scribble cell polarity complex component 2. (1005 aa)    
Predicted Functional Partners:
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.984
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.984
lrrc1
Leucine rich repeat containing 1.
    
 0.906
ENSACLP00000006908
Scribble planar cell polarity protein.
    
 0.906
LOC113010204
Discs, large (Drosophila) homolog 1, like; Belongs to the MAGUK family.
    
 0.901
ENSACLP00000036643
Discs, large homolog 2 (Drosophila).
    
 0.901
ENSACLP00000036889
Uncharacterized protein.
    
 0.901
ENSACLP00000036890
L27_1 domain-containing protein.
    
 0.901
LOC113009621
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.901
ENSACLP00000020107
Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.
    
 0.898
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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