STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003820Uncharacterized protein. (83 aa)    
Predicted Functional Partners:
LOC113030206
Malate synthase-like.
  
 
 0.948
ENSACLP00000002706
Fumarate hydratase.
  
 
 0.945
pc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.929
ENSACLP00000028847
Malate dehydrogenase.
  
 0.927
cs
Citrate synthase; Belongs to the citrate synthase family.
  
 0.920
ENSACLP00000010419
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.913
LOC113025482
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.913
LOC113031950
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.913
mdh1
Malate dehydrogenase.
  
 0.908
LOC113034741
Malate dehydrogenase 1Ab, NAD (soluble).
  
 0.908
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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