Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ENSACLP00000003832DNA-binding protein SATB. (820 aa)    
Predicted Functional Partners:
UBL5
Ubiquitin like 5.
    
 0.896
atf4
Activating transcription factor 4a.
    
 0.723
LOC113021099
Activating transcription factor 4b.
    
 0.723
LOC113021093
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.661
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.661
sumo1
Small ubiquitin-related modifier.
    
 0.653
pias1
Protein inhibitor of activated STAT, 1b.
    
  0.604
LOC113019428
Protein inhibitor of activated STAT, 1a.
    
  0.604
ENSACLP00000025785
Protein inhibitor of activated STAT, 2.
    
  0.604
pias4
Protein inhibitor of activated STAT, 4a.
    
  0.604
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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