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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003846Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b. (1429 aa)    
Predicted Functional Partners:
ENSACLP00000012724
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
0.902
grin1
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
0.902
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.872
LOC113015779
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.872
grin2c
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
  
  
 
0.792
LOC113028189
Uncharacterized protein.
  
  
 
0.791
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.713
p2rx2
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
 0.696
p2rx1
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
   
 
  0.681
grin3b
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.673
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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