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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113015985Potassium voltage-gated channel, subfamily H (eag-related), member 3. (1145 aa)    
Predicted Functional Partners:
LOC113013133
Aldo_ket_red domain-containing protein.
    
 0.459
kcnab2
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
    
 0.459
LOC113010167
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
    
 0.441
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.441
ENSACLP00000012057
Aldo_ket_red domain-containing protein.
    
 0.441
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.441
kcnd1
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
   
 0.429
kcne4
Potassium voltage-gated channel, Isk-related family, member 4.
     
 0.415
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
    0.410
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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