STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113012129Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
dcxr
Dicarbonyl/L-xylulose reductase.
     
 0.622
ENSACLP00000000787
Prostaglandin E synthase 2-like; Belongs to the GST superfamily.
     
  0.600
ptges3
Prostaglandin E synthase 3a (cytosolic).
     
 0.537
LOC113028551
Si:ch211-131k2.3.
     
 0.537
hpgd
15-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.477
LOC113030449
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.477
LOC113030448
Zgc:56585; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.477
ENSACLP00000023003
Zgc:56585; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.477
c16h2orf69
Zgc:153521.
   
 
 0.475
LOC113017608
Microsomal glutathione S-transferase 1.2.
     
 0.463
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (28%) [HD]