STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113030260Junctional adhesion molecule 3b. (333 aa)    
Predicted Functional Partners:
ENSACLP00000041338
Junctional adhesion molecule 2a.
    
0.954
ENSACLP00000013773
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.914
LOC113021929
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.914
LOC113011389
Par-3 family cell polarity regulator alpha, b.
    
 0.907
PARD3
Par-3 family cell polarity regulator.
    
 0.907
LOC113030602
F11 receptor, tandem duplicate 1.
    
0.886
LOC113008411
Integrin beta.
     
 0.876
LOC113008364
Junctional adhesion molecule 2b.
     
0.848
jam3
Junctional adhesion molecule 3a.
  
  
 
0.848
ENSACLP00000000583
Immunoglobulin superfamily, member 5a.
     
 0.748
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.