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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLKLMixed lineage kinase domain like pseudokinase. (474 aa)    
Predicted Functional Partners:
LOC113019113
Receptor-interacting serine-threonine kinase 3.
   
0.968
ENSACLP00000037208
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
0.966
LOC113026884
Uncharacterized protein.
   
0.941
LOC113031642
Tumor necrosis factor b (TNF superfamily, member 2).
    
 0.898
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
 0.894
LOC113037291
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.876
LOC113037290
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
 0.867
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.867
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.849
vps4a
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
    
  0.846
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.