Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003892Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
ENSACLP00000035971
SH2 domain containing 1A duplicate b.
   
 0.908
LOC113029495
SH2 domain-containing protein.
   
 0.898
ENSACLP00000000548
Ig-like domain-containing protein.
   
 0.698
ENSACLP00000004306
Ig-like domain-containing protein.
   
 0.698
ENSACLP00000004336
Ig-like domain-containing protein.
   
 0.698
ENSACLP00000015341
SPG21 abhydrolase domain containing, maspardin.
      
 0.654
LOC113036831
SAM domain, SH3 domain and nuclear localisation signals 1a.
   
  
 0.622
fancm
Uncharacterized protein.
    
 0.610
ENSACLP00000017593
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.566
ENSACLP00000018204
Protein tyrosine phosphatase receptor type C.
   
 0.565
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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