close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003903Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2398 aa)    
Predicted Functional Partners:
tecpr2
Tectonin beta-propeller repeat containing 2.
   
  
 0.664
atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.576
snap29
Synaptosome associated protein 29.
      
 0.576
ei24
EI24 autophagy associated transmembrane protein.
      
 0.558
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
      
 0.553
atg3
Autophagy-related protein 3.
      
 0.537
ENSACLP00000010914
t-SNARE coiled-coil homology domain-containing protein.
      
 0.536
atg14
Autophagy related 14.
      
 0.536
LOC113034002
Vesicle-associated membrane protein 8 (endobrevin).
      
 0.535
atg13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
      
 0.534
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.