Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000003903Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2398 aa)    
Predicted Functional Partners:
gabarap
GABA(A) receptor-associated protein b.
    
 0.936
ENSACLP00000008630
GABA(A) receptor-associated protein like 2.
    
 0.936
LOC113027204
GABA type A receptor associated protein like 2.
    
 0.936
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.932
map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
    
 0.932
ENSACLP00000003628
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.906
LOC113007004
Microtubule-associated protein 1 light chain 3 gamma, like.
    
 0.906
ENSACLP00000034307
Zgc:92606.
    
 0.906
LOC113022896
Si:dkey-13a21.4.
    
 0.893
LOC113022863
RAB7a, member RAS oncogene family.
     
 0.859
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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