STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc5gDnaJ (Hsp40) homolog, subfamily C, member 5 gamma a. (221 aa)    
Predicted Functional Partners:
tfip11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.888
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.859
prpf19
Pre-mRNA processing factor 19.
    
   0.853
ENSACLP00000015184
BUD31 homolog.
    
   0.853
plrg1
Pleiotropic regulator 1.
    
   0.853
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.844
LOC113020169
Heat shock cognate 70-kd protein, tandem duplicate 1; Belongs to the heat shock protein 70 family.
 
 0.840
LOC113012856
Si:ch211-199o1.2; Belongs to the heat shock protein 70 family.
 
 0.839
LOC113031966
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.838
hspa8
Heat shock protein 8; Belongs to the heat shock protein 70 family.
 
 0.838
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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