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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003920Pyridoxal-dependent decarboxylase domain containing 1. (759 aa)    
Predicted Functional Partners:
ENSACLP00000014972
Heat shock factor binding protein 1a.
      
 0.576
LOC113021498
PPP1R35_C domain-containing protein.
      
 0.538
BFAR
Bifunctional apoptosis regulator.
      
 0.534
ENSACLP00000014515
PAXIP1 associated glutamate-rich protein 1.
      
 0.534
NTAN1
N-terminal asparagine amidase.
      
 0.534
ccdc6
Coiled-coil domain containing 6a.
      
 0.521
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.520
tatdn2
TatD DNase domain containing 2.
      
 0.499
carhsp1
Calcium regulated heat stable protein 1.
      
 0.485
ENSACLP00000018548
Uncharacterized protein.
      
 0.479
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.