Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
taf1cWu:fj64h06. (1109 aa)    
Predicted Functional Partners:
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.951
suox
Sulfite oxidase.
  
  0.861
ENSACLP00000013216
TATA box binding protein.
   
 0.842
ENSACLP00000024319
TATA box binding protein like 2.
   
 0.842
ENSACLP00000026452
Uncharacterized protein.
   
 0.842
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.814
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
  0.805
LOC113035232
Germ cell nuclear acidic peptidase.
    
 0.781
cdk7
Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily.
    
 0.756
ENSACLP00000019391
Cyclin-dependent kinase 20.
    
 0.756
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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