Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113025122Aminopeptidase. (970 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
   
 0.865
lap3
Leucine aminopeptidase 3.
  
 0.865
enpep
Aminopeptidase.
  
 
0.860
LOC113006655
Prolyl endopeptidase.
    
 0.855
LOC113033541
Zgc:152830.
  
 0.851
cth
Cystathionase (cystathionine gamma-lyase), like.
  
 
 0.834
gclc
Glutamate-cysteine ligase, catalytic subunit.
     
 0.832
LOC113025766
Gamma-glutamyltransferase 1b.
    
 0.825
ggt1
Gamma-glutamyltransferase 1a.
    
 0.825
gclm
Glutamate-cysteine ligase, modifier subunit.
  
 
  0.823
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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