LOC113030809 protein (Astatotilapia calliptera)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Knowledge-based Evidence

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co-expression

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Score

LOC113030809

Uncharacterized protein. (333 aa)

Predicted Functional Partners:

vps35

0.994

vps26a

0.991

ENSACLP00000016397

0.989

tbc1d5

0.952

snx12

0.944

snx3

0.944

ENSACLP00000018910

0.867

LOC113026420

0.867

SNX2

0.867

LOC113014537

0.863

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000016397	ENSACLP00000018910	ENSACLP00000016397	ENSACLP00000018910	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin 1b.	0.927
ENSACLP00000016397	LOC113014537	ENSACLP00000016397	ENSACLP00000014554	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin 27a.	0.939
ENSACLP00000016397	LOC113026420	ENSACLP00000016397	ENSACLP00000036382	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin 1a.	0.927
ENSACLP00000016397	LOC113030809	ENSACLP00000016397	ENSACLP00000003941	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Uncharacterized protein.	0.989
ENSACLP00000016397	SNX2	ENSACLP00000016397	ENSACLP00000036512	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin 2.	0.950
ENSACLP00000016397	snx12	ENSACLP00000016397	ENSACLP00000013908	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin 12.	0.982
ENSACLP00000016397	snx3	ENSACLP00000016397	ENSACLP00000030312	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Sorting nexin 3.	0.985
ENSACLP00000016397	tbc1d5	ENSACLP00000016397	ENSACLP00000000576	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	TBC1 domain family, member 5.	0.991
ENSACLP00000016397	vps26a	ENSACLP00000016397	ENSACLP00000012134	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	VPS26, retromer complex component A.	0.999
ENSACLP00000016397	vps35	ENSACLP00000016397	ENSACLP00000015525	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.999
ENSACLP00000018910	ENSACLP00000016397	ENSACLP00000018910	ENSACLP00000016397	Sorting nexin 1b.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.927
ENSACLP00000018910	LOC113014537	ENSACLP00000018910	ENSACLP00000014554	Sorting nexin 1b.	Sorting nexin 27a.	0.728
ENSACLP00000018910	LOC113030809	ENSACLP00000018910	ENSACLP00000003941	Sorting nexin 1b.	Uncharacterized protein.	0.867
ENSACLP00000018910	SNX2	ENSACLP00000018910	ENSACLP00000036512	Sorting nexin 1b.	Sorting nexin 2.	0.875
ENSACLP00000018910	snx12	ENSACLP00000018910	ENSACLP00000013908	Sorting nexin 1b.	Sorting nexin 12.	0.527
ENSACLP00000018910	snx3	ENSACLP00000018910	ENSACLP00000030312	Sorting nexin 1b.	Sorting nexin 3.	0.527
ENSACLP00000018910	tbc1d5	ENSACLP00000018910	ENSACLP00000000576	Sorting nexin 1b.	TBC1 domain family, member 5.	0.748
ENSACLP00000018910	vps26a	ENSACLP00000018910	ENSACLP00000012134	Sorting nexin 1b.	VPS26, retromer complex component A.	0.924
ENSACLP00000018910	vps35	ENSACLP00000018910	ENSACLP00000015525	Sorting nexin 1b.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.930
LOC113014537	ENSACLP00000016397	ENSACLP00000014554	ENSACLP00000016397	Sorting nexin 27a.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.939