Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003966Spermatogenesis associated 6. (311 aa)    
Predicted Functional Partners:
RSPH1
Radial spoke head component 1.
   
  
 0.864
cfap52
Cilia and flagella associated protein 52.
   
  
 0.782
spata20
Spermatogenesis associated 20.
      
 0.712
TSSK2
Testis specific serine kinase 2; Belongs to the protein kinase superfamily.
   
  
 0.696
spata17
Spermatogenesis associated 17.
      
 0.671
ttc26
Tetratricopeptide repeat domain 26.
   
  
 0.667
LOC113032763
Speriolin_C domain-containing protein.
      
 0.662
ENSACLP00000023894
Spermatogenesis associated 18.
   
  
 0.662
LOC113007474
Fas apoptotic inhibitory molecule a.
      
 0.657
spata7
Spermatogenesis associated 7.
      
 0.656
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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