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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhdLactate dehydrogenase D. (496 aa)    
Predicted Functional Partners:
ENSACLP00000016277
Hydroxyacid oxidase (glycolate oxidase) 1.
  
 0.950
hao2
Hydroxyacid oxidase 2 (long chain).
  
 0.950
ENSACLP00000038481
Uncharacterized protein.
  
 0.950
LOC113030206
Malate synthase-like.
  
 
 0.947
LOC113026538
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.916
phgdh
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.913
LOC113027040
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.900
LOC113006361
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.900
LOC113031405
Cytochrome b5 reductase 4.
  
 0.897
bckdha
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
 0.894
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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