STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lssTerpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (735 aa)    
Predicted Functional Partners:
ENSACLP00000016678
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
 
 0.999
LOC113006809
Phosphoethanolamine methyltransferase.
   
 0.990
ENSACLP00000038598
SE domain-containing protein.
 
 
 0.988
nsdhl
NAD(P) dependent steroid dehydrogenase-like; Belongs to the 3-beta-HSD family.
 
 
 0.987
LOC113031766
Squalene epoxidase a.
 
 
 0.987
idi1
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.983
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
 
 
 0.982
LOC113016200
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.981
LOC113010628
Uncharacterized protein.
   
 
 0.981
LOC113027168
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.979
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.