Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
khdrbs2KH domain containing, RNA binding, signal transduction associated 2. (344 aa)    
Predicted Functional Partners:
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.796
ENSACLP00000008120
RAS p21 protein activator (GTPase activating protein) 1a.
    
 
 0.786
grb2
Growth factor receptor-bound protein 2b.
    
   0.784
LOC113025582
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.736
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.736
ENSACLP00000012998
Tyrosine-protein kinase.
    
 0.728
ENSACLP00000013037
Tyrosine-protein kinase.
    
 0.728
LOC113012164
Tyrosine-protein kinase.
    
 0.728
fyn
Tyrosine-protein kinase.
    
 0.728
LOC113014252
Tyrosine-protein kinase.
    
 0.728
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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