Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004008Down syndrome cell adhesion molecule b. (2021 aa)    
Predicted Functional Partners:
nck2
Cytoplasmic protein.
    
 0.799
nck1
Cytoplasmic protein.
    
 0.799
LOC113018723
Netrin 5.
   
 0.792
NTN1
Netrin 1.
   
 0.792
LOC113028454
Netrin 2.
   
 0.792
LOC113021247
Netrin 1b.
   
 0.792
ENSACLP00000006413
DCC netrin 1 receptor.
    
 0.724
ENSACLP00000019899
Neogenin 1b.
    
 0.724
LOC113025216
Immunoglobulin superfamily, DCC subclass, member 4.
    
 0.705
ENSACLP00000013425
Tyrosine-protein phosphatase non-receptor type.
    
  0.558
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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