Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113016249Arachidonate 15-lipoxygenase type B. (670 aa)    
Predicted Functional Partners:
LOC113023601
Uncharacterized protein.
    
 0.814
ENSACLP00000007478
Protein interacting with cyclin A1.
     
 0.801
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
   
 
 0.801
LOC113024298
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
    
  0.801
LOC113027257
Phospholipase A2 group III.
     
 0.801
ptgs2
Prostaglandin-endoperoxide synthase 2b.
    
 0.799
LOC113033554
PA2c domain-containing protein.
     
 0.799
pla2g12a
Phospholipase A2, group XIIA.
    
  0.799
pla2g4a
Phospholipase A2.
     
 0.798
LOC113012219
LRAT domain-containing protein.
    
  0.798
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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