Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TATDN3TatD DNase domain containing 3. (270 aa)    
Predicted Functional Partners:
skap2
Src kinase associated phosphoprotein 2.
      
 0.739
LOC113013184
Tyrosine-protein kinase.
      
 0.702
SRC
Tyrosine-protein kinase.
      
 0.702
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
     
 0.674
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
      
 0.656
bend7
Si:ch211-220f12.4.
      
 0.656
ENSACLP00000040048
Otolin 1a.
      
 0.655
optn
Optineurin.
      
 0.616
ENSACLP00000003992
Uncharacterized protein.
   
  
 0.615
tatdn1
TatD DNase domain containing 1.
      
 0.614
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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