STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adam10Uncharacterized protein. (768 aa)    
Predicted Functional Partners:
adam17
ADAM metallopeptidase domain 17b.
     
0.869
ENSACLP00000002998
Si:ch1073-396h14.1.
  
  
0.840
LOC113008784
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
    
 0.738
LOC113011684
Ephrin-A2a; Belongs to the ephrin family.
    
 0.738
LOC113031642
Tumor necrosis factor b (TNF superfamily, member 2).
     
 0.661
tspan14
Tetraspanin.
   
 0.658
ENSACLP00000031548
Notch receptor 1b.
    
 0.644
LOC113025559
Notch receptor 1a.
    
 0.644
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
   
 
  0.641
ENSACLP00000037698
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.630
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.