Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (389 aa)    
Predicted Functional Partners:
igf2bp3
Insulin-like growth factor 2 mRNA binding protein 3.
    
 
 0.810
LOC113024716
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.726
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.726
ccna1
Cyclin A1; Belongs to the cyclin family.
   
 0.715
LOC113031225
Cyclin A2; Belongs to the cyclin family.
   
 0.705
LOC113033094
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.682
LOC113025693
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.682
LOC113025455
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.682
prkaa2
Non-specific serine/threonine protein kinase.
     
 0.668
prkaa1
Non-specific serine/threonine protein kinase.
     
 0.668
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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