Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000004076Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family. (360 aa)    
Predicted Functional Partners:
ENSACLP00000024683
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.954
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.941
ENSACLP00000029283
Importin 9.
    
 
 0.896
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.891
nol6
Nucleolar protein 6.
   
 
 0.890
anapc7
Anaphase promoting complex subunit 7.
    
   0.867
taf3
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.
    
   0.850
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
   
   0.850
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.848
PES1-2
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.848
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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