STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lypla1Lysophospholipase 1. (232 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.880
lpcat3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
   
 
 0.872
ENSACLP00000030440
Phospholipase A2, group XV.
     
 0.870
LOC113019119
Lysophosphatidylcholine acyltransferase 4.
  
 
 0.863
ENSACLP00000037343
Uncharacterized protein.
     
 0.862
LOC113015017
Lysophosphatidylcholine acyltransferase 1.
    
 0.861
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
    
 0.861
ENSACLP00000010045
Si:dkey-177p2.18.
     
 0.860
lpcat2
Lysophosphatidylcholine acyltransferase 2.
    
 0.857
ENSACLP00000030483
Lecithin-cholesterol acyltransferase.
     
 0.856
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.