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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004101Serine/threonine-protein phosphatase with EF-hands. (683 aa)    
Predicted Functional Partners:
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
    
 0.847
ENSACLP00000037904
Anaphase promoting complex subunit 1.
    
 0.812
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
   
 0.802
ppp4r3b
Protein phosphatase 4, regulatory subunit 3B.
   
 0.802
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.800
LOC113017428
Uncharacterized protein.
    
 0.800
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.796
LOC113034570
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.795
LOC113033017
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.795
LOC113025993
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.795
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.