STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmpr1aReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (529 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
    
 0.978
bmp2
Bone morphogenetic protein 2b.
    
 0.970
LOC113036990
Bone morphogenetic protein 16.
    
 0.968
gdf5
Growth differentiation factor 5.
    
 0.964
LOC113032230
Growth differentiation factor 6a.
    
 0.964
bmp6
Bone morphogenetic protein 6; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.945
ENSACLP00000025583
Growth differentiation factor 7.
    
 0.941
LOC113012044
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
  
 
0.938
ENSACLP00000025423
Growth differentiation factor 7.
    
 0.934
LOC113033226
Mothers against decapentaplegic homolog.
   
 0.933
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.