STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004134TBD domain-containing protein. (627 aa)    
Predicted Functional Partners:
LOC113031642
Tumor necrosis factor b (TNF superfamily, member 2).
    
 
 0.911
ENSACLP00000027421
5-azacytidine induced 2.
    
 0.895
LOC113013036
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
     
 0.854
tank
TRAF family member-associated NFKB activator.
     
 0.854
tbkbp1
TBK1 binding protein 1.
  
  
 
0.852
optn
Optineurin.
     
 0.806
ENSACLP00000013242
Deoxyribonuclease; Belongs to the DNase I family.
     
 0.726
LOC113021872
Uncharacterized protein.
     
 0.726
ENSACLP00000025083
Deoxyribonuclease 1 like 4, tandem duplicate 2.
     
 0.726
ENSACLP00000036786
Deoxyribonuclease; Belongs to the DNase I family.
     
 0.726
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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