Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000004167Periostin, osteoblast specific factor a. (853 aa)    
Predicted Functional Partners:
ENSACLP00000026996
VWFA domain-containing protein.
   
 
 0.751
lum
Lumican.
   
  
 0.741
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
    
   0.728
ENSACLP00000036917
Dachsous cadherin-related 1a.
      
 0.692
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.691
prrx1
Paired related homeobox 1a.
   
  
 0.676
fkbpl
FKBP prolyl isomerase like.
   
  
 0.671
atoh8
BHLH domain-containing protein.
      
 0.635
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 
 0.626
tcf21
Transcription factor 21.
      
 0.604
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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