Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113029331SRY-box transcription factor 32. (312 aa)    
Predicted Functional Partners:
sox17
SRY-box transcription factor 17.
   
 
 0.904
ENSACLP00000011542
Transcription factor 7 like 2.
    
  0.892
ENSACLP00000021267
Transcription factor 7.
    
  0.892
ENSACLP00000032642
Lymphoid enhancer-binding factor 1.
    
  0.892
SOX18
SRY-box transcription factor 18.
   
 
 0.888
ENSACLP00000015078
Transcription factor 7 like 1b.
    
  0.885
ENSACLP00000017134
HMG box domain-containing protein.
    
  0.885
sox7
SRY-box transcription factor 7.
   
 
 0.851
mixl1
Mix paired-like homeobox.
   
 0.800
gata5
GATA binding protein 5.
    
 0.782
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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