Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034764AA_permease_C domain-containing protein. (608 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.776
LOC113022284
Macrophage stimulating 1 receptor a.
    
  0.776
mst1r
Macrophage stimulating 1 receptor b.
    
  0.776
ENSACLP00000033251
2-epi-5-epi-valiolone synthase.
   
 0.635
oip5
Mis18 domain-containing protein.
      
 0.549
slc3a1
Solute carrier family 3 member 1.
  
 0.516
ENSACLP00000034296
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
     
 0.511
ENSACLP00000037698
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.511
tirap
Toll-interleukin 1 receptor (TIR) domain containing adaptor protein.
     
 0.507
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
   
  0.504
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (58%) [HD]