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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdac9Histone deacetylase 9b. (623 aa)    
Predicted Functional Partners:
ENSACLP00000008692
AT rich interactive domain 4A (RBP1-like).
    
 0.931
ENSACLP00000034796
Translocase of outer mitochondrial membrane 20.
    
 0.931
LOC113035099
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 0.878
LOC113030349
H2A histone family, member Y; Belongs to the histone H2A family.
    
 0.878
ENSACLP00000018602
SIN3 transcription regulator family member Ab.
    
 0.809
haus5
SIN3 transcription regulator family member B.
    
 0.809
sin3a
SIN3 transcription regulator family member Aa.
    
 0.809
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.785
ENSACLP00000010348
Nuclear receptor corepressor 1.
    
 0.755
ncor2
Nuclear receptor corepressor 2.
    
 0.755
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.