hdac9 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

hdac9

Histone deacetylase 9b. (623 aa)

Predicted Functional Partners:

prkn

0.878

ENSACLP00000008692

0.870

ENSACLP00000034796

0.870

camk4

0.848

H2AZ1

0.840

LOC113033615

0.840

nme9

0.823

ENSACLP00000017156

0.820

LOC113022297

0.806

ENSACLP00000037701

0.806

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000008692	ENSACLP00000017156	ENSACLP00000008692	ENSACLP00000017156	AT rich interactive domain 4A (RBP1-like).	WD repeat domain 90.	0.489
ENSACLP00000008692	ENSACLP00000034796	ENSACLP00000008692	ENSACLP00000034796	AT rich interactive domain 4A (RBP1-like).	Translocase of outer mitochondrial membrane 20.	0.870
ENSACLP00000008692	H2AZ1	ENSACLP00000008692	ENSACLP00000019066	AT rich interactive domain 4A (RBP1-like).	Histone H2A; Belongs to the histone H2A family.	0.928
ENSACLP00000008692	LOC113033615	ENSACLP00000008692	ENSACLP00000035579	AT rich interactive domain 4A (RBP1-like).	Histone H2A; Belongs to the histone H2A family.	0.928
ENSACLP00000008692	hdac9	ENSACLP00000008692	ENSACLP00000004208	AT rich interactive domain 4A (RBP1-like).	Histone deacetylase 9b.	0.870
ENSACLP00000017156	ENSACLP00000008692	ENSACLP00000017156	ENSACLP00000008692	WD repeat domain 90.	AT rich interactive domain 4A (RBP1-like).	0.489
ENSACLP00000017156	ENSACLP00000034796	ENSACLP00000017156	ENSACLP00000034796	WD repeat domain 90.	Translocase of outer mitochondrial membrane 20.	0.489
ENSACLP00000017156	camk4	ENSACLP00000017156	ENSACLP00000004266	WD repeat domain 90.	Si:ch73-60h1.1; Belongs to the protein kinase superfamily.	0.588
ENSACLP00000017156	hdac9	ENSACLP00000017156	ENSACLP00000004208	WD repeat domain 90.	Histone deacetylase 9b.	0.820
ENSACLP00000017156	nme9	ENSACLP00000017156	ENSACLP00000023412	WD repeat domain 90.	NME/NM23 family member 8; Belongs to the NDK family.	0.950
ENSACLP00000034796	ENSACLP00000008692	ENSACLP00000034796	ENSACLP00000008692	Translocase of outer mitochondrial membrane 20.	AT rich interactive domain 4A (RBP1-like).	0.870
ENSACLP00000034796	ENSACLP00000017156	ENSACLP00000034796	ENSACLP00000017156	Translocase of outer mitochondrial membrane 20.	WD repeat domain 90.	0.489
ENSACLP00000034796	H2AZ1	ENSACLP00000034796	ENSACLP00000019066	Translocase of outer mitochondrial membrane 20.	Histone H2A; Belongs to the histone H2A family.	0.928
ENSACLP00000034796	LOC113033615	ENSACLP00000034796	ENSACLP00000035579	Translocase of outer mitochondrial membrane 20.	Histone H2A; Belongs to the histone H2A family.	0.928
ENSACLP00000034796	hdac9	ENSACLP00000034796	ENSACLP00000004208	Translocase of outer mitochondrial membrane 20.	Histone deacetylase 9b.	0.870
ENSACLP00000037701	hdac9	ENSACLP00000037701	ENSACLP00000004208	TAR DNA binding protein, like.	Histone deacetylase 9b.	0.806
ENSACLP00000037701	prkn	ENSACLP00000037701	ENSACLP00000011571	TAR DNA binding protein, like.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.991
H2AZ1	ENSACLP00000008692	ENSACLP00000019066	ENSACLP00000008692	Histone H2A; Belongs to the histone H2A family.	AT rich interactive domain 4A (RBP1-like).	0.928
H2AZ1	ENSACLP00000034796	ENSACLP00000019066	ENSACLP00000034796	Histone H2A; Belongs to the histone H2A family.	Translocase of outer mitochondrial membrane 20.	0.928
H2AZ1	hdac9	ENSACLP00000019066	ENSACLP00000004208	Histone H2A; Belongs to the histone H2A family.	Histone deacetylase 9b.	0.840