Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113026544Ankyrin repeat and SOCS box containing 13b. (289 aa)    
Predicted Functional Partners:
LOC113036014
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.910
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.910
rnf7
Ring finger protein 7.
    
 0.800
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.787
psmd8
Proteasome 26S subunit, non-ATPase 8.
    
 0.697
asb6
Ankyrin repeat and SOCS box containing 6.
    
 0.686
ube2j1
Ubiquitin-conjugating enzyme E2, J1.
    
 0.674
psmd12
Proteasome 26S subunit, non-ATPase 12.
    
 0.672
psme3
Proteasome activator subunit 3.
    
 
 0.663
LOC113019345
Ubiquitin-like domain-containing protein.
    
 0.655
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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