STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd83Ig-like domain-containing protein. (225 aa)    
Predicted Functional Partners:
LOC113031642
Tumor necrosis factor b (TNF superfamily, member 2).
   
  
 0.617
ccr7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.572
LOC113013369
CD40 molecule, TNF receptor superfamily member 5.
   
  
 0.551
LOC113030983
Ras-related GTP binding A.
      
 0.526
il10
Interleukin 10.
      
 0.493
ENSACLP00000037142
Uncharacterized protein.
      
 0.459
ENSACLP00000000379
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
  
 0.455
ENSACLP00000018274
SCY domain-containing protein.
   
  
 0.453
ENSACLP00000009141
Uncharacterized protein.
   
  
 0.422
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.