Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004237Dedicator of cytokinesis 4b; Belongs to the DOCK family. (1904 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
ENSACLP00000016203
Ribosomal protein L6.
  
 0.995
LOC113034576
Ribosomal protein L26.
  
 0.994
rpl24
Ribosomal protein L24.
  
 0.994
rpl14
Ribosomal protein L14.
  
 0.994
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 0.994
ENSACLP00000014023
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.994
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
  
 0.994
rpl36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.994
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.994
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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