STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndrg4NDRG family member 4. (466 aa)    
Predicted Functional Partners:
ENSACLP00000002417
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta).
    
 0.487
agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3.
    
 0.487
lclat1
Lysocardiolipin acyltransferase 1.
    
 0.467
rmdn1
Regulator of microtubule dynamics 1.
    
 0.467
LOC113034745
Regulator of microtubule dynamics 2.
    
 0.467
rmdn3
Regulator of microtubule dynamics 3.
    
 0.465
gins3
GINS complex subunit 3.
      
 0.461
agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon).
    
  0.460
lpgat1
Lysophosphatidylglycerol acyltransferase 1.
    
  0.460
LOC113020795
Zgc:171489.
    
  0.460
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.