STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rusc2RUN and SH3 domain containing 2. (1663 aa)    
Predicted Functional Partners:
mvd
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.885
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.878
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 0.843
idi1
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.831
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.818
ENSACLP00000034723
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
    
 0.797
ENSACLP00000029372
Coenzyme Q2 4-hydroxybenzoate polyprenyltransferase.
  
 
 0.789
ENSACLP00000001129
RAB35, member RAS oncogene family b.
    
 
 0.785
LOC113020194
Si:dkey-16l2.16.
    
 
 0.785
ubiad1
UbiA prenyltransferase domain containing 1.
    
 0.773
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.