STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
camk4Si:ch73-60h1.1; Belongs to the protein kinase superfamily. (479 aa)    
Predicted Functional Partners:
CALML6
Calmodulin like 6.
   
 0.951
calm1
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.908
calm1-2
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.908
calm1-3
Calmodulin.
   
 0.908
ENSACLP00000037109
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.908
ENSACLP00000020804
Calmodulin-like 4a.
   
 0.897
ENSACLP00000034132
Calmodulin-like 4b.
   
 0.882
atf4
Activating transcription factor 4a.
   
  0.880
nos1
Nitric oxide synthase; Produces nitric oxide (NO).
   
 0.866
LOC113025872
Si:ch73-62l21.1.
  
 
0.865
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.