STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020420Phosphoinositide phospholipase C. (1214 aa)    
Predicted Functional Partners:
hcrtr2
Hypocretin (orexin) receptor 2.
    
 0.899
LOC113009034
Pro-melanin concentrating hormone.
   
 
 0.888
ENSACLP00000040852
Pro-melanin-concentrating hormone, like.
   
 
 0.888
ENSACLP00000031169
Neurotensin.
     
 0.691
LOC113022538
Uncharacterized protein.
     
 0.689
tac1
Tachykinin 1.
     
 0.657
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
   
 0.639
ENSACLP00000017281
Uncharacterized protein.
   
 0.639
ENSACLP00000023707
Ligand of numb-protein X 1.
   
 0.639
LOC113007607
Ligand of numb-protein X 2b.
   
 0.639
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.