STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004274Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
SLC39A11
Solute carrier family 39 member 11.
   
 0.555
slc39a13
Solute carrier family 39 member 13.
   
 0.521
ENSACLP00000007517
Uncharacterized protein.
  
  
 0.457
atp7a
ATPase copper transporting alpha.
  
  
 0.457
ENSACLP00000016868
ATPase copper transporting beta.
  
  
 0.457
slc30a4
Solute carrier family 30 member 4.
  
 
 
0.448
slc30a9
Solute carrier family 30 member 9.
  
 
 0.438
slc30a7
Solute carrier family 30 member 7.
  
 
 
0.418
SLC39A12
Solute carrier family 39 member 12.
  
 0.413
LOC113033378
Solute carrier family 39 member 14.
  
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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