ENSACLP00000004274 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSACLP00000004274

Uncharacterized protein. (340 aa)

Predicted Functional Partners:

SLC39A11

0.543

slc39a13

0.531

LOC113022632

0.517

LOC113012914

0.517

slc30a9

0.483

tfip11

0.469

slc30a7

0.435

rfk

0.433

pudp

0.427

ccs

0.424

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000004274	LOC113012914	ENSACLP00000004274	ENSACLP00000023662	Uncharacterized protein.	Uncharacterized protein.	0.517
ENSACLP00000004274	LOC113022632	ENSACLP00000004274	ENSACLP00000006636	Uncharacterized protein.	Solute carrier family 11 member 2.	0.517
ENSACLP00000004274	SLC39A11	ENSACLP00000004274	ENSACLP00000031104	Uncharacterized protein.	Solute carrier family 39 member 11.	0.543
ENSACLP00000004274	ccs	ENSACLP00000004274	ENSACLP00000021058	Uncharacterized protein.	Copper chaperone for superoxide dismutase.	0.424
ENSACLP00000004274	pudp	ENSACLP00000004274	ENSACLP00000012062	Uncharacterized protein.	Pseudouridine 5'-phosphatase.	0.427
ENSACLP00000004274	rfk	ENSACLP00000004274	ENSACLP00000033901	Uncharacterized protein.	Riboflavin kinase.	0.433
ENSACLP00000004274	slc30a7	ENSACLP00000004274	ENSACLP00000031172	Uncharacterized protein.	Solute carrier family 30 member 7.	0.435
ENSACLP00000004274	slc30a9	ENSACLP00000004274	ENSACLP00000005318	Uncharacterized protein.	Solute carrier family 30 member 9.	0.483
ENSACLP00000004274	slc39a13	ENSACLP00000004274	ENSACLP00000038230	Uncharacterized protein.	Solute carrier family 39 member 13.	0.531
ENSACLP00000004274	tfip11	ENSACLP00000004274	ENSACLP00000002912	Uncharacterized protein.	Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.	0.469
LOC113012914	ENSACLP00000004274	ENSACLP00000023662	ENSACLP00000004274	Uncharacterized protein.	Uncharacterized protein.	0.517
LOC113012914	SLC39A11	ENSACLP00000023662	ENSACLP00000031104	Uncharacterized protein.	Solute carrier family 39 member 11.	0.876
LOC113012914	slc30a7	ENSACLP00000023662	ENSACLP00000031172	Uncharacterized protein.	Solute carrier family 30 member 7.	0.430
LOC113012914	slc30a9	ENSACLP00000023662	ENSACLP00000005318	Uncharacterized protein.	Solute carrier family 30 member 9.	0.448
LOC113012914	slc39a13	ENSACLP00000023662	ENSACLP00000038230	Uncharacterized protein.	Solute carrier family 39 member 13.	0.870
LOC113022632	ENSACLP00000004274	ENSACLP00000006636	ENSACLP00000004274	Solute carrier family 11 member 2.	Uncharacterized protein.	0.517
LOC113022632	SLC39A11	ENSACLP00000006636	ENSACLP00000031104	Solute carrier family 11 member 2.	Solute carrier family 39 member 11.	0.876
LOC113022632	slc30a7	ENSACLP00000006636	ENSACLP00000031172	Solute carrier family 11 member 2.	Solute carrier family 30 member 7.	0.430
LOC113022632	slc30a9	ENSACLP00000006636	ENSACLP00000005318	Solute carrier family 11 member 2.	Solute carrier family 30 member 9.	0.448
LOC113022632	slc39a13	ENSACLP00000006636	ENSACLP00000038230	Solute carrier family 11 member 2.	Solute carrier family 39 member 13.	0.870