STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004292Hypocretin (orexin) neuropeptide precursor. (124 aa)    
Predicted Functional Partners:
hcrtr2
Hypocretin (orexin) receptor 2.
    
 0.901
LOC113009034
Pro-melanin concentrating hormone.
   
 
 0.888
ENSACLP00000040852
Pro-melanin-concentrating hormone, like.
   
 
 0.888
ENSACLP00000031169
Neurotensin.
     
 0.691
LOC113022538
Uncharacterized protein.
     
 0.689
tac1
Tachykinin 1.
     
 0.657
LOC113030789
Gamma-aminobutyric acid (GABA) A receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
     
 0.641
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
   
 0.639
ENSACLP00000017281
Uncharacterized protein.
   
 0.639
ENSACLP00000023707
Ligand of numb-protein X 1.
   
 0.639
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.