ENSACLP00000004293 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000004293

TGF_BETA_2 domain-containing protein. (214 aa)

Predicted Functional Partners:

ENSACLP00000033904

0.893

LOC113033571

0.730

LOC113012807

0.698

LOC113034379

0.658

ENSACLP00000004855

0.658

LOC113019082

0.658

ENSACLP00000030400

0.657

ENSACLP00000000381

0.642

gdf9

0.613

LOC113020014

0.610

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000000381	ENSACLP00000004293	ENSACLP00000000381	ENSACLP00000004293	R-spondin 1.	TGF_BETA_2 domain-containing protein.	0.642
ENSACLP00000000381	ENSACLP00000033904	ENSACLP00000000381	ENSACLP00000033904	R-spondin 1.	Anti-Mullerian hormone.	0.699
ENSACLP00000000381	LOC113012807	ENSACLP00000000381	ENSACLP00000038575	R-spondin 1.	Zgc:194189.	0.580
ENSACLP00000000381	LOC113019082	ENSACLP00000000381	ENSACLP00000029767	R-spondin 1.	Bone morphogenetic protein 15.	0.655
ENSACLP00000000381	LOC113020014	ENSACLP00000000381	ENSACLP00000027690	R-spondin 1.	Cytochrome P450, family 19, subfamily A, polypeptide 1a; Belongs to the cytochrome P450 family.	0.485
ENSACLP00000000381	LOC113033571	ENSACLP00000000381	ENSACLP00000006582	R-spondin 1.	Doublesex and mab-3 related transcription factor 1.	0.665
ENSACLP00000000381	LOC113034379	ENSACLP00000000381	ENSACLP00000004317	R-spondin 1.	Folliculogenesis specific bHLH transcription factor.	0.616
ENSACLP00000000381	gdf9	ENSACLP00000000381	ENSACLP00000010110	R-spondin 1.	Growth differentiation factor 9.	0.758
ENSACLP00000004293	ENSACLP00000000381	ENSACLP00000004293	ENSACLP00000000381	TGF_BETA_2 domain-containing protein.	R-spondin 1.	0.642
ENSACLP00000004293	ENSACLP00000004855	ENSACLP00000004293	ENSACLP00000004855	TGF_BETA_2 domain-containing protein.	Hydroxysteroid (17-beta) dehydrogenase 1.	0.658
ENSACLP00000004293	ENSACLP00000030400	ENSACLP00000004293	ENSACLP00000030400	TGF_BETA_2 domain-containing protein.	Cytochrome P450, family 11, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.	0.657
ENSACLP00000004293	ENSACLP00000033904	ENSACLP00000004293	ENSACLP00000033904	TGF_BETA_2 domain-containing protein.	Anti-Mullerian hormone.	0.893
ENSACLP00000004293	LOC113012807	ENSACLP00000004293	ENSACLP00000038575	TGF_BETA_2 domain-containing protein.	Zgc:194189.	0.698
ENSACLP00000004293	LOC113019082	ENSACLP00000004293	ENSACLP00000029767	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 15.	0.658
ENSACLP00000004293	LOC113020014	ENSACLP00000004293	ENSACLP00000027690	TGF_BETA_2 domain-containing protein.	Cytochrome P450, family 19, subfamily A, polypeptide 1a; Belongs to the cytochrome P450 family.	0.610
ENSACLP00000004293	LOC113033571	ENSACLP00000004293	ENSACLP00000006582	TGF_BETA_2 domain-containing protein.	Doublesex and mab-3 related transcription factor 1.	0.730
ENSACLP00000004293	LOC113034379	ENSACLP00000004293	ENSACLP00000004317	TGF_BETA_2 domain-containing protein.	Folliculogenesis specific bHLH transcription factor.	0.658
ENSACLP00000004293	gdf9	ENSACLP00000004293	ENSACLP00000010110	TGF_BETA_2 domain-containing protein.	Growth differentiation factor 9.	0.613
ENSACLP00000004855	ENSACLP00000004293	ENSACLP00000004855	ENSACLP00000004293	Hydroxysteroid (17-beta) dehydrogenase 1.	TGF_BETA_2 domain-containing protein.	0.658
ENSACLP00000004855	ENSACLP00000030400	ENSACLP00000004855	ENSACLP00000030400	Hydroxysteroid (17-beta) dehydrogenase 1.	Cytochrome P450, family 11, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.	0.953