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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004297Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
LOC113032460
DEK proto-oncogene.
    
 0.625
LOC113021093
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.566
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.566
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.566
LOC113006831
BTB domain-containing protein.
    
 0.503
ENSACLP00000007520
Potassium channel tetramerisation domain containing 12b.
    
 0.503
ENSACLP00000008015
Potassium channel tetramerization domain containing 6a.
    
 0.503
LOC113035538
Potassium channel tetramerization domain containing 16a.
    
 0.503
kctd16
Potassium channel tetramerization domain containing 16b.
    
 0.503
ENSACLP00000020375
Potassium channel tetramerization domain containing 14.
    
 0.503
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.