STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem94Transmembrane protein 94. (1369 aa)    
Predicted Functional Partners:
fibp
Fibroblast growth factor (acidic) intracellular binding protein a.
    
 
 0.974
cdk5
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
   0.875
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.779
ENSACLP00000012384
Transmembrane protein 88 a.
      
 0.713
tmem161a
Transmembrane protein 161A.
      
 0.669
tmem97
Transmembrane protein 97.
      
 0.669
ENSACLP00000006351
Transmembrane protein 178.
      
 0.656
ENSACLP00000027049
SLIT and NTRK-like family, member 2.
      
 0.633
CASKIN2
CASK interacting protein 2.
   
  
 0.601
LOC113027722
Uncharacterized protein.
   
  
 0.601
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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